Ribosome-mediated polymerization of long chain carbon and cyclic amino acids into peptides in vitro

Abstract

Ribosome-mediated polymerization of backbone-extended monomers into polypeptides is challenging due to their poor compatibility with the translation apparatus, which evolved to use α-L-amino acids. Moreover, mechanisms to acylate (or charge) these monomers to transfer RNAs (tRNAs) to make aminoacyl-tRNA substrates is a bottleneck. Here, we rationally design non-canonical amino acid analogs with extended carbon chains (γ-, δ-, ε-, and ζ-) or cyclic structures (cyclobutane, cyclopentane, and cyclohexane) to improve tRNA charging. We then demonstrate site-specific incorporation of these non-canonical, backbone-extended monomers at the N- and C- terminus of peptides using wild-type and engineered ribosomes. This work expands the scope of ribosome-mediated polymerization, setting the stage for new medicines and materials.

Document Details

Document Type
Pub Defense Publication
Publication Date
Aug 27, 2020
Source ID
10.1038/s41467-020-18001-x

Entities

People

  • Do Soon Kim
  • Jeffrey S. Moore
  • Joongoo Lee
  • Kevin J. Schwarz
  • Michael C Jewett

Organizations

  • Army Research Office
  • National Science Foundation

Tags

Fields of Study

  • Biology
  • Computer science

Readers

  • Molecular Genetics
  • Organic Chemistry
  • Systems Analysis and Design