A robust approach for MicroED sample preparation of lipidic cubic phase embedded membrane protein crystals

Abstract

Crystallizing G protein-coupled receptors (GPCRs) in lipidic cubic phase (LCP) often yields crystals suited for the cryogenic electron microscopy (cryoEM) method microcrystal electron diffraction (MicroED). However, sample preparation is challenging. Embedded crystals cannot be targeted topologically. Here, we use an integrated fluorescence light microscope (iFLM) inside of a focused ion beam and scanning electron microscope (FIB-SEM) to identify fluorescently labeled GPCR crystals. Crystals are targeted using the iFLM and LCP is milled using a plasma focused ion beam (pFIB). The optimal ion source for preparing biological lamellae is identified using standard crystals of proteinase K. Lamellae prepared using either argon or xenon produced the highest quality data and structures. MicroED data are collected from the milled lamellae and the structures are determined. This study outlines a robust approach to identify and mill membrane protein crystals for MicroED and demonstrates plasma ion-beam milling is a powerful tool for preparing biological lamellae.

Document Details

Document Type
Pub Defense Publication
Publication Date
Feb 25, 2023
Source ID
10.1038/s41467-023-36733-4

Entities

People

  • Anna Shiriaeva
  • Johan Hattne
  • Max T B Clabbers
  • Michael W. Martynowycz
  • Sara J. Weaver
  • Tamir Gonen
  • William J. Nicolas

Organizations

  • Defense Threat Reduction Agency
  • Howard Hughes Medical Institute
  • National Institute of General Medical Sciences

Tags

Fields of Study

  • Chemistry

Readers

  • Chemistry (specifically Chemical Fluorescence)
  • Materials Science and Engineering.
  • Molecular and Cellular Biochemistry

Technology Areas

  • Microelectronics
  • Microelectronics - Graphene