LitPathExplorer: a confidence-based visual text analytics tool for exploring literature-enriched pathway models

Abstract

Pathway models are valuable resources that help us understand the various mechanisms underpinning complex biological processes. Their curation is typically carried out through manual inspection of published scientific literature to find information relevant to a model, which is a laborious and knowledge-intensive task. Furthermore, models curated manually cannot be easily updated and maintained with new evidence extracted from the literature without automated support.

Document Details

Document Type
Pub Defense Publication
Publication Date
Dec 08, 2017
Source ID
10.1093/bioinformatics/btx774

Entities

People

  • Axel J. Soto
  • Chrysoula Zerva
  • Riza Batista-navarro
  • Sophia Ananiadou

Organizations

  • Defense Advanced Research Projects Agency
  • Engineering and Physical Sciences Research Council
  • University of Manchester

Tags

Readers

  • Database Systems and Applications
  • Neural Network Machine Learning.
  • Organizational Process Management (OPM).