Cross-type biomedical named entity recognition with deep multi-task learning

Abstract

State-of-the-art biomedical named entity recognition (BioNER) systems often require handcrafted features specific to each entity type, such as genes, chemicals and diseases. Although recent studies explored using neural network models for BioNER to free experts from manual feature engineering, the performance remains limited by the available training data for each entity type.

Document Details

Document Type
Pub Defense Publication
Publication Date
Oct 11, 2018
Source ID
10.1093/bioinformatics/bty869

Entities

People

  • Curtis Langlotz
  • Jiawei Han
  • Jingbo Shang
  • Marinka Žitnik
  • Xiang Ren
  • Xuan Wang
  • Yu Zhang
  • Yuhao Zhang

Organizations

  • Defense Advanced Research Projects Agency
  • Division of Information and Intelligent Systems
  • National Institute of General Medical Sciences
  • Stanford University
  • United States Army Research Laboratory
  • University of Illinois Urbana–Champaign
  • University of Southern California

Tags

Fields of Study

  • Computer science

Readers

  • Neural Network Machine Learning.

Technology Areas

  • AI & ML
  • AI & ML - Information Retrieval
  • AI & ML - Neural Networks
  • Biotechnology