Protein Sequence Annotation Tool (PSAT): a centralized web-based meta-server for high-throughput sequence annotations

Abstract

Here we introduce the Protein Sequence Annotation Tool (PSAT), a web-based, sequence annotation meta-server for performing integrated, high-throughput, genome-wide sequence analyses. Our goals in building PSAT were to (1) create an extensible platform for integration of multiple sequence-based bioinformatics tools, (2) enable functional annotations and enzyme predictions over large input protein fasta data sets, and (3) provide a web interface for convenient execution of the tools.

Document Details

Document Type
Pub Defense Publication
Publication Date
Jan 20, 2016
Source ID
10.1186/s12859-016-0887-y

Entities

People

  • Aldrin Montana
  • Amy Huang
  • Carol L. Ecale Zhou
  • Eithon Cadag
  • Elo Leung
  • Jan Lorenz Soliman

Organizations

  • Defense Threat Reduction Agency
  • United States Department of Energy

Tags

Fields of Study

  • Biology

Readers

  • Database Systems and Applications
  • Energy Conservation and Renewable Energy Engineering.
  • Molecular Genetics