ADEPT, a dynamic next generation sequencing data error-detection program with trimming
Abstract
Illumina is the most widely used next generation sequencing technology and produces millions of short reads that contain errors. These sequencing errors constitute a major problem in applications such as de novo genome assembly, metagenomics analysis and single nucleotide polymorphism discovery.
Document Details
- Document Type
- Pub Defense Publication
- Publication Date
- Feb 29, 2016
- Source ID
- 10.1186/s12859-016-0967-z
Entities
People
- Chien-Chi Lo
- Patrick S. G. Chain
- Po-e Li
- Shihai Feng
Organizations
- Defense Threat Reduction Agency