Hybridization chain reaction enables a unified approach to multiplexed, quantitative, high-resolution immunohistochemistry and in situ hybridization

Abstract

RNA in situ hybridization based on the mechanism of the hybridization chain reaction (HCR) enables multiplexed, quantitative, high-resolution RNA imaging in highly autofluorescent samples, including whole-mount vertebrate embryos, thick brain slices and formalin-fixed paraffin-embedded tissue sections. Here, we extend the benefits of one-step, multiplexed, quantitative, isothermal, enzyme-free HCR signal amplification to immunohistochemistry, enabling accurate and precise protein relative quantitation with subcellular resolution in an anatomical context. Moreover, we provide a unified framework for simultaneous quantitative protein and RNA imaging with one-step HCR signal amplification performed for all target proteins and RNAs simultaneously.

Document Details

Document Type
Pub Defense Publication
Publication Date
Nov 15, 2021
Source ID
10.1242/dev.199847

Entities

People

  • Harry Choi
  • Maayan Schwarzkopf
  • Mike C. Liu
  • N. Husain
  • Niles A. Pierce
  • Rachel Ives
  • Samuel J. Schulte

Organizations

  • California Institute of Technology
  • Defense Advanced Research Projects Agency
  • National Institutes of Health

Tags

Fields of Study

  • Biology

Readers

  • Molecular and Cellular Biochemistry
  • Oncology and Biomarker-Based Cancer Detection.