A Gene Panel for Early Identification of Future Responders to Immune Checkpoint Blockade

Abstract

Immune checkpoint blockade (ICB), therapies that target the PD-1 pathway, CTLA-4 pathway, and other checkpoint pathways, lead to durable responses in many cancer types. Since only a minority of patients respond to ICB, it may be useful to identify the future responders early in the course of treatment. In this study we evaluated a small (15 genes) biologically motivated panel, consisting of genes involved in immune activation and checkpoint pathways, for early identification of future responders to ICB. The panel passed consistency check, pathological and in-silico validations, and was an excellent predictor (area under ROC curve >0.95) of eventual response to ICB, both CTLA-4 and PD-1 blockade, when applied to metastatic melanoma patients undergoing ICB (i.e., “on-treatment”) in a publicly available dataset. These results suggest that this small biologically motivated panel may be useful for early identification of future responders to ICB.

Document Details

Document Type
Pub Defense Publication
Publication Date
Mar 03, 2022
Source ID
10.3389/fgene.2022.706468

Entities

People

  • Anil Betigeri
  • Anshuman Panda
  • Shridar Ganesan

Organizations

  • National Cancer Institute
  • United States Department of Defense
  • Val Skinner Foundation

Tags

Fields of Study

  • Biology

Readers

  • Oncology
  • Oncology and Biomarker-Based Cancer Detection.

Technology Areas

  • AI & ML