How Well Can We Infer Selection Benefits and Mutation Rates from Allele Frequencies?

Abstract

Experimentalists observe allele frequency distributions and try to infer mutation rates and selection coefficients. How easy is this? We calculate limits to their ability in the context of the Wright-Fisher model by first finding the maximal amount of information that can be acquired using allele frequencies about the mutation rate and selection coefficient– at least 2 bits per allele– and then by finding how the organisms would have shaped their mutation rates and selection coefficients so as to maximize the information transfer.

Document Details

Document Type
Pub Defense Publication
Publication Date
Apr 04, 2023
Source ID
10.3390/e25040615

Entities

People

  • Jonathan Soriano
  • Sarah Marzen

Organizations

  • Air Force Office of Scientific Research
  • Pitzer College

Tags

Fields of Study

  • Biology

Readers

  • Molecular and genetic basis of cancer.
  • Spectroscopy.
  • Systems Analysis and Design

Technology Areas

  • AI & ML
  • AI & ML - Bayesian Inference