Computationally designed high specificity inhibitors delineate the roles of BCL2 family proteins in cancer

Abstract

Many cancers overexpress one or more of the six human pro-survival BCL2 family proteins to evade apoptosis. To determine which BCL2 protein or proteins block apoptosis in different cancers, we computationally designed three-helix bundle protein inhibitors specific for each BCL2 pro-survival protein. Following in vitro optimization, each inhibitor binds its target with high picomolar to low nanomolar affinity and at least 300-fold specificity. Expression of the designed inhibitors in human cancer cell lines revealed unique dependencies on BCL2 proteins for survival which could not be inferred from other BCL2 profiling methods. Our results show that designed inhibitors can be generated for each member of a closely-knit protein family to probe the importance of specific protein-protein interactions in complex biological processes.

Document Details

Document Type
Pub Defense Publication
Publication Date
Nov 02, 2016
Source ID
10.7554/elife.20352

Entities

People

  • Alex Zelter
  • Barry L Stoddard
  • Betty W Shen
  • Daciana Margineantu
  • Daniel-adriano Silva
  • David Baker
  • David M. Hockenbery
  • Erik Procko
  • Erinna F Lee
  • Guillaume Lessene
  • Jean-marc Garnier
  • Kusum Chawla
  • Marco J Herold
  • Michael J. Maccoss
  • Patrick S Stayton
  • Richard Johnson
  • Stephanie Berger
  • Trisha N. Davis
  • W Douglas Fairlie

Organizations

  • Australian Research Council
  • Cancer Council Victoria
  • Consejo Nacional de Humanidades, Ciencias y TecnologĂ­as
  • Defense Threat Reduction Agency
  • Fred Hutchinson Cancer Center
  • Howard Hughes Medical Institute
  • La Trobe Institute for Molecular Science
  • La Trobe University
  • National Health and Medical Research Council
  • National Institutes of Health
  • National Science Foundation
  • Olivia Newton-John Cancer Research Institute
  • The Pew Charitable Trusts
  • University of Illinois Urbana–Champaign
  • University of Melbourne
  • University of Washington
  • WEHI
  • Worldwide Cancer Research

Tags

Fields of Study

  • Biology
  • Chemistry

Readers

  • Cellular and Molecular Pathways of Apoptosis.
  • Molecular and Cellular Biochemistry

Technology Areas

  • AI & ML