Distributed Spatiotemporal Dynamics of Synthetic Gene Circuits

Abstract

In this project we developed a multi-scale computational approach for analysis of multi-cellular processes in large bacterial populations and design of distributed synthetic gene circuits. This approach integrates discrete agent simulations of single cells with PDE modeling of large-scale dynamics. We applied this framework to computational modeling of spatiotemporal dynamics of growing bacterial biofilms and the dynamics of multi-strain bacterial populations.

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Document Details

Document Type
Technical Report
Publication Date
Oct 12, 2018
Accession Number
AD1064759

Entities

People

  • Lev S Tsimring

Organizations

  • University of California

Tags

Communities of Interest

  • Energy and Power Technologies

DTIC Thesaurus Topics

  • Abstracts
  • Agent-Based Simulations
  • Bacteria
  • Bacteriology
  • Biological Phenomena
  • California
  • Cell Membrane
  • Cell Movement
  • Classification
  • Computational Modeling
  • Computational Science
  • Computer Simulations
  • Computing-Related Activities
  • Continents
  • Contract Administration
  • Contracts
  • Dynamics
  • Geographic Regions
  • Information Operations
  • Mathematical Models
  • Membrane Potentials
  • Microbiology
  • Microorganisms
  • Military Research
  • Models
  • Monitoring
  • Multiscale Modeling
  • Multiscale Simulations
  • Security
  • Simulations
  • Stress (Physiology)
  • Systems Biology
  • Two Dimensional
  • Universities

Fields of Study

  • Biology

Readers

  • Computational Fluid Dynamics (CFD)
  • Microbial Pathology
  • Neural Network Machine Learning.

Technology Areas

  • Biotechnology