Stochastic Computing Machines Enabled by DNA Self-Assembly

Abstract

The overall goal of this project is to determine optimal configuration and dynamics of spatially arranged chromophores on a self-assembled DNA grid, based on the principle of energy migration. Photonic wires are molecular devices that convey excited-state energy from an input to an output. The photonic wire in this project focuses on an array of chromophores engaging in multi-step FRET. This wire borrows from Resonance Energy Transfer and Energy migration principles predicted by Forster's theory. Energy migration works on the principle ofhomo-transfer, which involves identical dye molecules (chromophores) exchanging energy. Their band gap is such that there is a large enough singlet spread, and a small stokes shift with overlapping absorption and emission spectra, which results in a back-and-forth exciton diffusion. Hetero-transfer, on the other hand, uses a Donor-Acceptor configuration in which a Donor dye molecule excites an acceptor whose absorption spectrum overlaps with the donors emission spectrum. Each subsequent acceptor then becomes a donor to the next-in-line acceptor.

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Document Details

Document Type
Technical Report
Publication Date
Jul 14, 2016
Accession Number
AD1080597

Entities

People

  • Chris Dwyer

Organizations

  • Duke University

Tags

Communities of Interest

  • Energy and Power Technologies

DTIC Thesaurus Topics

  • Absorption
  • Absorption Spectra
  • Algorithms
  • Bayesian Inference
  • Bayesian Networks
  • Computational Science
  • Computer Programming
  • Computer Programs
  • Computers
  • Data Mining
  • Data Set
  • Data Sets
  • Databases
  • Dynamic Range
  • Emission Spectra
  • Energy Transfer
  • Floating Point Operations
  • Image Processing
  • Information Science
  • Monte Carlo Method
  • Probabilistic Models
  • Probability
  • Probability Distributions
  • Random Variables
  • Statistical Sampling
  • Topology

Readers

  • Chemistry (specifically Chemical Fluorescence)
  • Nanocomposite Materials Science
  • Systems Analysis and Design

Technology Areas

  • Microelectronics