A Population-Based Temporal Logic Gate for Timing and Recording Chemical Events

Abstract

Engineered bacterial sensors have potential applications in human health monitoring, environmental chemical detection, and materials biosynthesis. While such bacterial devices have long been engineered to differentiate between combinations of inputs, their potential to process signal timing and duration has been overlooked. In this work, we present a two-input temporal logic gate that can sense and record the order of the inputs, the timing between inputs, and the duration of input pulses. Our temporal logic gate design relies on unidirectional DNA recombination mediated by bacteriophage integrases to detect and encode sequences of input events.

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Document Details

Document Type
Technical Report
Publication Date
May 01, 2016
Accession Number
AD1088026

Entities

People

  • Paul W. Rothemund
  • Richard M. Murray
  • Victoria Hsiao
  • Yutaka Hori

Organizations

  • California Institute of Technology

Tags

Communities of Interest

  • Biomedical

DTIC Thesaurus Topics

  • Anti-Bacterial Agents
  • Bacteria
  • Computational Biology
  • Computational Science
  • Data Analysis
  • Demography
  • Detection
  • Detectors
  • Engineering
  • Equations
  • Experimental Data
  • Gene Expression
  • Genetics
  • Logic Gates
  • Markov Models
  • Synthetic Biology
  • Systems Biology

Readers

  • Integrated Circuit Design and Technology.
  • Molecular Genetics
  • Vision Science/Vision Psychology/Cognitive Neuroscience.