QSIPrep: An Integrative Platform for Preprocessing and Reconstructing Diffusion MRI

Abstract

Diffusion-weighted magnetic resonance imaging (dMRI) is the primary method for noninvasively studying the organization of white matter in the human brain. Here we introduce QSIPrep, an integrative software platform for the processing of diffusion images that is compatible with nearly all dMRI sampling schemes. Drawing on a diverse set of software suites to capitalize on their complementary strengths, QSIPrep facilitates the implementation of best practices for processing of diffusion images.

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Document Details

Document Type
Technical Report
Publication Date
Jun 21, 2021
Accession Number
AD1193777

Entities

People

  • Adam Pines
  • Adam Richie-Halford
  • Allyson Mackey
  • Anders Perrone
  • Anisha Keshavan
  • Ariel Rokem
  • Azeez Adebimpe
  • Barry Giesbrecht
  • Bart Larsen
  • Beatriz Luna
  • Christos Davatzikos
  • Damien Fair
  • Danielle Bassett
  • David R Roalf
  • Desmond Oathes
  • Eleftherios Garyfallidis
  • Eric Earl
  • Fang-Cheng Yeh
  • Geoffrey Aguirre
  • Jason Yeatman
  • Jean M Vettel
  • John Detre
  • Josiane Bourque
  • Laura Cabral
  • Mark Elliot
  • Matthew Cieslak
  • Max B Kelz
  • Michael P. Milham
  • Panagiotis Fotiadis
  • Philip Cook
  • Raquel Gur
  • Richard F Betzel
  • Ruben Gur
  • Scott T. Grafton
  • Shreyas Fadnavis
  • Theodore D Satterthwaite
  • Thijs Dhollander
  • Tinashe Tapera
  • Ursula Tooley
  • Valerie Sydnor
  • Will Foran
  • Xiaosong He

Organizations

  • Child Mind Institute
  • Indiana University
  • Murdoch Children's Research Institute
  • Oregon Health & Science University
  • Stanford University
  • United States Army Research Laboratory
  • University of California, Santa Barbara
  • University of Minnesota
  • University of Pennsylvania
  • University of Pittsburgh
  • University of Washington

Tags

Communities of Interest

  • Biomedical
  • Energy and Power Technologies

DTIC Thesaurus Topics

  • Acquisition
  • Algorithms
  • Best Practices
  • Compressed Sensing
  • Computational Science
  • Coordinate Systems
  • Data Analysis
  • Data Processing
  • Distortion
  • Eddy Currents
  • Image Processing
  • Magnetic Resonance
  • Magnetic Resonance Imaging
  • Neuroimaging
  • Orientation (Direction)
  • Standards
  • Statistical Sampling
  • Visualizations

Readers

  • Medical Imaging.
  • Parallel and Distributed Computing.
  • Systems Analysis and Design