Tool Integration Framework for Bio-Informatics
Abstract
Experience in developing tool integration solutions for engineer domains indicates that the key ingredient for robust tool integration is semantically precise definition of interchange format. The project described in this report developed a robust, scalable, extensible, and standards-based tool integration framework for systems biology applications. Model-based techniques were developed and applied to formally and precisely define the interchange formats using metamodels and semantic well-formedness rules. These interchange formats were used for integrating diverse systems biology computational tools. The report describes the tool integration framework, interchange formats, and applications to representative systems biology workflows.
Document Details
- Document Type
- Technical Report
- Publication Date
- Apr 01, 2007
- Accession Number
- ADA469991
Entities
People
- Sandeep Neema
Organizations
- Vanderbilt University