DIYA: A Bacterial Annotation Pipeline for any Genomics Lab

Abstract

Summary: DIYA (Do-It-Yourself Annotator) is a modular and configurable open source pipeline software, written in Perl, used for the rapid annotation of bacterial genome sequences. The software is currently used to take DNA contigs as input, either in the form of complete genomes or the result of shotgun sequencing, and produce an annotated sequence in Genbank file format as output.

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Document Details

Document Type
Technical Report
Publication Date
Feb 12, 2009
Accession Number
ADA532907

Entities

People

  • Andrew C. Stewart
  • Brian Osborn
  • Timothy D Read

Organizations

  • Naval Medical Research Center

Tags

DTIC Thesaurus Topics

  • Acids
  • Biological Sciences
  • Biology
  • Biomedical Information Systems
  • Biomedical Research
  • Biotechnology
  • Chemistry
  • Computational Biology
  • Genetics
  • Genomics
  • Governments
  • Infectious Diseases
  • Microbial Genome
  • Nucleic Acids
  • Pipelines
  • Sequences
  • United States Government

Fields of Study

  • Biology

Readers

  • Database Systems and Applications
  • Molecular Genetics