AGeS: A Software System for Microbial Genome Sequence Annotation
Abstract
The annotation of genomes from next-generation sequencing platforms needs to be rapid, high-throughput,and fully integrated and automated. Although a few Web-based annotation services have recently become available, they may not be the best solution for researchers that need to annotate a large number of genomes, possibly including proprietary data, and store them locally for further analysis. To address this need, we developed a standalone software application, the Annotation of microbial Genome Sequences (AGeS) system, which incorporates publicly available and inhouse- developed bioinformatics tools and databases, many of which are parallelized for high-throughput performance.
Document Details
- Document Type
- Technical Report
- Publication Date
- Mar 01, 2011
- Accession Number
- ADA538584
Entities
People
- Chenggang Yu
- Deepak Grover
- Jaques Reifman
- Kamal Kumar
- Li Cheng
- Maxim Khitrov
- Nela Zavaljevski
- Ravi V. Satya
- Valmik Desai
Organizations
- United States Army Medical Research and Development Command