Discovering Fundamental Laws Governing Prokaryotic Adaptation in Surface-to-Surface Transitions Using Data-Driven Inverse Modeling

Abstract

We aim to develop a new mathematical theory for modeling how synthetic and naturally occurring operons in E. coli act as layered computational units to implement models of adaptive learning during phase transitions. In so doing, we aim to lay the foundation for a new generation of biologically inspired and biologically implemented computing systems, capable of low-power learning applications. More precisely, we seek to discover and characterize the time-scales and layered network models that govern surface-to-surface transitions of prokaryotic organisms, e.g. Acinetobacter baylyi. Many prokaryotes exhibit the ability to persist even on nutrient starved and non-organic surfaces, such as metal or plastic nosocomial surfaces. The precise metabolic and adaptation dynamics of these prokaryotes is poorly understood. We propose a data-driven operator theoretic approach to reverse engineer and establish the fundamental rules of learning that enable bacteria to persist in surface-to-surface transitions.

Document Details

Document Type
DoD Grant Award
Publication Date
Jul 09, 2020
Source ID
W911NF2010165

Entities

People

  • Enoch Yeung

Organizations

  • Army Contracting Command
  • United States Army
  • University of California, Santa Barbara

Tags

Fields of Study

  • Biology

Readers

  • Distributed Systems and Data Platform Development
  • Molecular Genetics
  • Naval Mine Countermeasure Systems Development.